NGS 2014 Tutorial - Databases
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So you want to get some sequencing data in NCBI?
MG-RAST and its API
NGS 2014 Tutorial - Databases
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Welcome to NGS 2014 Tutorial - Databases’s documentation!
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Welcome to NGS 2014 Tutorial - Databases’s documentation!
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Contents:
So you want to get some sequencing data in NCBI?
The challenge
What is an API and how does it relate to NCBI?
Automating with an API
Exercise - Downloading data
Comment on Genbank files
MG-RAST and its API
Example Usage
Exercise - Download
Working with Annotations
A note on JSON
Exercise - linking MG-RAST to taxonomy
Indices and tables
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Index
Module Index
Search Page
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